Visualization of OME-TIFF images and segmentation masks

from vitessce import (
    VitessceConfig,
    Component as cm,
    CoordinationType as ct,
    OmeTiffWrapper,
    MultiImageWrapper,
    CoordinationLevel as CL,
    ObsSegmentationsOmeTiffWrapper,
    ImageOmeTiffWrapper,
    get_initial_coordination_scope_prefix,
)

vc = VitessceConfig(schema_version="1.0.16")
dataset = vc.add_dataset(name='Spraggins').add_object(
    ImageOmeTiffWrapper(
        img_url="https://storage.googleapis.com/vitessce-demo-data/kpmp-f2f-march-2023/S-1905-017737/S-1905-017737_PAS_2of2_bf.ome.tif",
        offsets_url="https://storage.googleapis.com/vitessce-demo-data/kpmp-f2f-march-2023/S-1905-017737/S-1905-017737_PAS_2of2_bf.offsets.json"
    )
).add_object(
    ObsSegmentationsOmeTiffWrapper(
        img_url="https://storage.googleapis.com/vitessce-demo-data/kpmp-f2f-march-2023/S-1905-017737/S-1905-017737_PAS_2of2.ome.tif",
        offsets_url="https://storage.googleapis.com/vitessce-demo-data/kpmp-f2f-march-2023/S-1905-017737/S-1905-017737_PAS_2of2.offsets.json",
        obs_types_from_channel_names=True
    )
)

spatial = vc.add_view("spatialBeta", dataset=dataset)
lc = vc.add_view("layerControllerBeta", dataset=dataset)

vc.link_views_by_dict([spatial, lc], {
    "imageLayer": CL([
        {
          "photometricInterpretation": "RGB"
        }
    ]),
}, meta=True, scope_prefix=get_initial_coordination_scope_prefix("A", "image"))

vc.layout(spatial | lc);

vw = vc.widget()
vw